ChromBERT
1.1.0

Getting started:

  • Installation
  • Quick Tour

Tutorials:

  • Tutorial for fine-tuning ChromBERT
  • Compiled Scripts for fine-tuning of ChromBERT
  • Tutorial for get context specific TRN embedding
  • CLI Reference

Examples:

  • Example for cistrome imputation using prompt-enhanced ChromBERT
  • Example for causal eQTL identification using prompt-enhanced ChromBERT
  • Example for context-specific TRN: functional collaborations with EZH2 on funtional distinct loci
  • Example for context-specific TRN: perturbation of STARR-seq
  • Example for key regulators inference during cell state transition
ChromBERT
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